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.:MAARJAM:.
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MaarjAM database resources
MaarjAM VT type sequences of 18S rDNA gene region
Sequences are trimmed between NS31-AML2 primers and primers removed. Only VT type sequences are listed.
Type 18S rDNA FASTA release (2021)Type 18S rDNA QIIME release (2021) MaarjAM VT sequences of 18S rDNA gene region
Sequences are trimmed between NS31-AML2 primers and primers removed. Only VT sequences are listed.
18S rDNA FASTA release (2021)18S rDNA QIIME release (2021) MaarjAM sequences of Krüger fragment
Sequences covering partial 18S rDNA + ITS1 + 5.8S + ITS2 + partial 28S rDNA marker regions.
Krüger fragment FASTA release (2021)Krüger fragment QIIME release (2021) MaarjAM sequences of ITS marker region
Sequences covering ITS1 + 5.8S + ITS2 marker regions.
ITS FASTA release (2021)ITS QIIME release (2021) MaarjAM sequences of 28S rDNA gene region
Sequences covering 28S rDNA gene region.
28S rDNA FASTA release (2021)28S rDNA QIIME release (2021) * trimming of 18S rDNA, ITS and 28S rDNA sequences is conducted with ITSx. When using data from the MaarjAM database, we kindly ask you to refer to this publication: Öpik, M., Vanatoa, A., Vanatoa, E., Moora, M., Davison, J., Kalwij, J.M., Reier, Ü., Zobel, M. 2010. The online database MaarjAM reveals global and
ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota). New Phytologist 188: 223-241.
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